| Detailed Information for Phage Bandik |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Ann-Catherine Stanton |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.44609 N, 79.957193 W Map |
| Discovery Notes | The phage was originally found by Johnathon Schiebel, and then was adopted by Ann Stanton. Soil was taken right below the surface, was light brown in color and contained some root matter |
| Naming Notes | The phage was originally found by Johnathon Schiebel, and then was adopted by Ann Stanton. Johnathon wanted to name the phage Bandik, after Dr. George Bandik, his Organic Chemistry 1 professor and his Organic Chemistry research-based lab instructor. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 7, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 903 |
| Genome length (bp) | 41804 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are clear, and typically appear as three different sizes: 2 mm in diameter, 4 mm in diameter, and 6 mm in diameter. This are the plaque sizes after 2 days; after only one, the plaques aren't always visible on the plate and are smaller in size. |
| Morphotype | Siphoviridae |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH045554 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
5 |
| Pitt Freezer Box Grid# |
B7 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
