Microbacterium phage Bernstein
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Detailed Information for Phage Bernstein
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByKerry Iles
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.444253 N, 79.953239 W Map
Naming NotesNamed after Leonard Bernstein
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 18, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage652
Genome length (bp)39926
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceACTCCCGGCA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and usually 3 mm in diameter, although there are some variable plaque sizes present
Number of Genes68
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Bernstein_1
(terminase small subunit)

Bernstein_2
(terminase)

Bernstein_3
(portal protein)

Bernstein_4
(capsid maturation protease)

Bernstein_5
(major capsid protein)

Bernstein_6

Bernstein_7
(head-to-tail adaptor)

Bernstein_8
(head-to-tail stopper)

Bernstein_9

Bernstein_10
(tail terminator)

Bernstein_11

Bernstein_13
(tail assembly chaperone)

Bernstein_12
(tail assembly chaperone)

Bernstein_14

Bernstein_15
(tape measure protein)

Bernstein_16
(minor tail protein)

Bernstein_17
(minor tail protein)

Bernstein_18

Bernstein_19

Bernstein_20
(endolysin)

Bernstein_21

Bernstein_22

Bernstein_23

Bernstein_24

Bernstein_25
(Cas4 family exonuclease)

Bernstein_26

Bernstein_27
(HicA-like toxin)

Bernstein_28
(deoxyuridine triphosphatase)

Bernstein_29
(thymidylate kinase)

Bernstein_30
(recombination directionality factor)

Bernstein_31

Bernstein_32

Bernstein_33
(NrdH-like glutaredoxin)

Bernstein_34
(holliday junction resolvase)

Bernstein_35

Bernstein_36

Bernstein_37

Bernstein_38

Bernstein_39
(DNA primase/helicase)

Bernstein_40
(DNA polymerase I)

Bernstein_41

Bernstein_42

Bernstein_43
(DNA binding protein)

Bernstein_44

Bernstein_45
(SprT-like protease)

Bernstein_46

Bernstein_47

Bernstein_48

Bernstein_49
(HNH endonuclease)

Bernstein_50

Bernstein_51

Bernstein_52

Bernstein_53

Bernstein_54

Bernstein_55

Bernstein_56
(dihydrofolate reductase)

Bernstein_57

Bernstein_58

Bernstein_59
(thymidylate synthase)

Bernstein_60

Bernstein_61

Bernstein_62

Bernstein_63

Bernstein_64

Bernstein_65

Bernstein_66

Bernstein_67

Bernstein_68 — tRNA
(tRNA-Asn(gtt))

Bernstein_69 — tRNA
(tRNA-Gln(ctg))

Bernstein_70
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834599
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 7
Pitt Freezer Box Grid# B4
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload