| Detailed Information for Phage Den3 |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Andrew Albers, Amy Cooper |
| Year Found | 2018 |
| Location Found | Kenosha, WI USA |
| Finding Institution | Carthage College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.62097 N, 87.821033 W Map |
| Discovery Notes | Soil sample was collected in a flower bed. Some wood chips were present, the soil was a soft, dark, "fluffy" dirt. |
| Naming Notes | Found in a flower bed near my dorm Denhart, and the phage was isolated from a 3-day enrichment |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 15, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1030 |
| Genome length (bp) | 41800 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Carthage College |
| Annotation Status | In GenBank |
| Plaque Notes | Usually found to be about 1 mm in diameter. Very temperate phage, with a hazy edge and inside. |
| Morphotype | Siphoviridae |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN062702 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
77 |
| Pitt Freezer Box Grid# |
C8 |
| Available Files |
| GenBank File for Phamerator | Download |