Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Former names | EverythingBagel |
Found By | V Burlak, K Brown, V Nguyen, T Flink |
Year Found | 2024 |
Location Found | Amherst, MA United States |
Finding Institution | University of Massachusetts Amherst |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 42.39439 N, 72.52515 W Map |
Discovery Notes | This sample was found in a moist patch of soil near a brick building. Some surrounding vegetation such as grass and weeds were also found. |
Naming Notes | We named our phage EverythinBagel, in reference to the movie Everything Everywhere all at Once. To obtain a phage, we had to get extra samples of soil from all sorts of places, having to isolate and purify all the samples at once. So, we figured EverythinBagel was a fitting name to represent this process. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2048 |
Genome length (bp) | 61534 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 201 bp |
GC Content | 67.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EG |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Massachusetts Amherst |
Annotation Status | Being Annotated (Expected completion by 1/16/2025) |
Plaque Notes | Our plaques were found to be clear, bullseye, and about 1 mm in size. |
Morphotype | Siphoviridae |
Number of Genes | 107 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |