Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | J Klimkowski, T Truong, A Prabhughate, L Nguyen |
Year Found | 2024 |
Location Found | Amherst, MA United States |
Finding Institution | University of Massachusetts Amherst |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 42.38927 N, 72.53084 W Map |
Discovery Notes | It was grassy, and the soil was moist but not muddy. It was between two buildings, the marching band building and Grinnell hall on campus, but it was also near a walking path. |
Naming Notes | We were thinking about names that we be fun and we were also thinking about things on campus that we enjoyed, and we came up with the deli at Franklin commons. We appreciate the guy who works there and the sandwiches he makes, so we named out phage after him. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3984 |
Genome length (bp) | 62289 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 221 bp |
GC Content | 67.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EG |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Massachusetts Amherst |
Annotation Status | Being Annotated (Expected completion by 1/16/2025) |
Plaque Notes | Usually between 0.5-1 millimeter in diameter with hazy edges and a whitish bullseye in the center |
Morphotype | Siphoviridae |
Number of Genes | 108 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |