Microbacterium phage Franklin22
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Franklin22
Discovery Information
Isolation HostMicrobacterium testaceum NRRL B-24232
Found ByJosiah Liotta
Year Found2019
Location FoundFort Montgomery, NY United States of America
Finding InstitutionAlliance University (formerly Nyack College)
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates41.3381 N, 73.981941 W Map
Discovery NotesThis phage, "Franklin", was discovered on 9/8/19 at 7:50a.m. The soil sample that I retrieved the phages from was 3 inches below the surface of dark, moist soil. It should be noted that the soil was near the center of a larger bush where piles of leaves have been decomposing every year around the fall season.
Naming NotesThis name came from the street that I collected it from in my hometown of Fort Montgomery,New York.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 19, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3246
Genome length (bp)40567
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceACTCCCGGCA
GC Content66.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Plaque NotesThis phage is known to form very large plaques (up to 17mm in diameter in 48 hours).
Number of Genes71
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Franklin22_1
(terminase small subunit)

Franklin22_2
(terminase large subunit)

Franklin22_3
(portal protein)

Franklin22_4
(capsid maturation protease)

Franklin22_5
(major capsid protein)

Franklin22_6

Franklin22_7
(head-to-tail adaptor)

Franklin22_8
(head-to-tail stopper)

Franklin22_9

Franklin22_10
(tail terminator)

Franklin22_11
(major tail protein)

Franklin22_12
(tail assembly chaperone)

Franklin22_13
(tail assembly chaperone)

Franklin22_14

Franklin22_15

Franklin22_16
(tape measure protein)

Franklin22_17
(minor tail protein)

Franklin22_18
(minor tail protein)

Franklin22_19
(minor tail protein)

Franklin22_20
(minor tail protein)

Franklin22_21
(endolysin)

Franklin22_22

Franklin22_23

Franklin22_24

Franklin22_25

Franklin22_26
(Cas4 family exonuclease)

Franklin22_27

Franklin22_28
(HicA-like toxin)

Franklin22_29
(deoxyuridine triphosphatase)

Franklin22_30
(thymidylate kinase)

Franklin22_31

Franklin22_32

Franklin22_33

Franklin22_34

Franklin22_35
(NrdH-like glutaredoxin)

Franklin22_36
(holliday junction resolvase)

Franklin22_37

Franklin22_38

Franklin22_39

Franklin22_40
(DNA primase/helicase)

Franklin22_41
(DNA polymerase I)

Franklin22_42

Franklin22_43

Franklin22_44
(DNA binding protein)

Franklin22_45

Franklin22_46
(SprT-like protease)

Franklin22_47

Franklin22_48

Franklin22_49

Franklin22_50

Franklin22_51
(HNH endonuclease)

Franklin22_52

Franklin22_53

Franklin22_54

Franklin22_55

Franklin22_56

Franklin22_57

Franklin22_58

Franklin22_59
(dihydrofolate reductase)

Franklin22_60

Franklin22_61
(thymidylate synthase)

Franklin22_62

Franklin22_63

Franklin22_64

Franklin22_65

Franklin22_66

Franklin22_67

Franklin22_68

Franklin22_69

Franklin22_70

Franklin22_71 — tRNA
(tRNA-Asn(gtt))

Franklin22_72 — tRNA
(tRNA-Gln(ctg))

Franklin22_73 — tRNA
(tRNA-Lys(ctt))

Franklin22_74
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK999979
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 97
Pitt Freezer Box Grid# B8
Available Files
GenBank File for PhameratorDownload