Detailed Information for Phage Hamlet |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Gabrielle Gentile |
Year Found | 2016 |
Location Found | Saint Clairsville, OH USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.057508 N, 80.905268 W Map |
Discovery Notes | This soil sample was found near the south end of the bike trail near my house. It was collected on 5.9 at around 3:10 PM. The weather was partly cloudy and windy. The soil was shaded by many trees. |
Naming Notes | Named after my favorite Shakespearean play. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 14, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1589 |
Genome length (bp) | 41934 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Hamlet forms turbid plaques that are approximately 1-2mm in size. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG839019 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
E8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |