Detailed Information for Phage Ixel |
Discovery Information |
Isolation Host | Microbacterium liquefaciens LMG 16120 |
Found By | Bethany Wise |
Year Found | 2019 |
Location Found | Rock Hill, SC USA |
Finding Institution | Winthrop University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 26°C |
GPS Coordinates | 34.9407 N, 81.0344 W Map |
Discovery Notes | This microbacteriophage was found 4 inches deep in the soil of an empty flower bed. The soil was moist and black in color. |
Naming Notes | I named my phage Ixel after my sister Lexi; it is the inverted spelling of her name. This phage is one of a kind, just like my sister. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 29, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1263 |
Genome length (bp) | 40556 |
Character of genome ends | Circularly Permuted |
GC Content | 63.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA11 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Winthrop University |
Annotation Status | In GenBank |
Plaque Notes | The plaques are small and around 5 mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 60 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT451983 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
97 |
Pitt Freezer Box Grid# |
A6 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |