Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Kayla Sweeney and Will Grillo |
Year Found | 2019 |
Location Found | Philadelphia, PA United States |
Finding Institution | University of the Sciences (now St. Joseph's Univ) |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 24°C |
GPS Coordinates | 39.945333 N, 75.207056 W Map |
Discovery Notes | In the University of the Sciences Flower Garden located in the Quad area, next to the path. About a foot away from foot traffic and about fifty feet from the Wilson Dining Hall. Seems to have been recently mulched. |
Naming Notes | Originally had a different name, but was taken in the data base. Mr. Worldwide inspiration came from a helpful Teaching Assistant that was always willing to be a guide during the phage isolation process. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 10, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 560 |
Genome length (bp) | 41810 |
Character of genome ends | Circularly Permuted |
GC Content | 63.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Southern California |
Annotation Status | In GenBank |
Plaque Notes | Plaques appeared to be extremely small and fill the entire plate. Plaques appeared to be very turbid and cloudy, with a small bullseye in the middle of the plaques when closely looked at on the bacterial lawn. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR521079 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.8*10^8 |
Pitt Freezer Box# |
98 |
Pitt Freezer Box Grid# |
D1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |