Microbacterium phage Pikmin
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Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Alexandra P McDonough |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.26625 N, 79.57094 W Map |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 29, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2318 |
Genome length (bp) | 39307 |
Character of genome ends | Circularly Permuted |
End Determination Notes | Pikmin was cut upstream of the terminase |
GC Content | 61.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EA |
Subcluster | EA3 |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 59 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MG944218 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 6 |
Pitt Freezer Box Grid# | A4 |
Available Files | |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |