Detailed Information for Phage QMacho |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Brian Camacho |
Year Found | 2021 |
Location Found | Charlotte, NC USA |
Finding Institution | Queens University of Charlotte |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 28°C |
GPS Coordinates | 35.189512 N, 80.831178 W Map |
Discovery Notes | The bacteriophage was found by a tree near Queens University of Charlotte during a sunny morning. |
Naming Notes | My last name is Camacho, and my lab partner who I worked with during this phage experiment's last name is Quigley, so we combined the last names. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 548 |
Genome length (bp) | 41685 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 67.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Queens University of Charlotte |
Annotation Status | In GenBank |
Plaque Notes | Medium sized and clear. |
Morphotype | Siphoviridae |
Number of Genes | 70 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP434443 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
SEA Lysate Titer |
2.3 x 10^9 pful/ml |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |