Detailed Information for Phage Raccoon |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Megan Ulbrich |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.443865 N, 80.005375 W Map |
Discovery Notes | Phage Raccoon was isolated from a soil sample collected at Point State Park in Pittsburgh, PA. The soil was silty and dry. |
Naming Notes | This phage is named Raccoon because of my love for the animals. Also called "Trash Pandas," the raccoon is one of the cutest and misunderstood animals in the northern hemisphere. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 11, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Genome length (bp) | 41894 |
Character of genome ends | Unknown |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Raccoon's plaques are incredibly hazy and vary in size up to ~2mm. They are very difficult to see on a plate and must be looked at with an additional light source. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG839025 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
6 |
Pitt Freezer Box Grid# |
H12 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |