Detailed Information for Phage Riyhil |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Former names | Ryeaaz |
Found By | Bora Feruku, Akhil Vindyala and Riyaz Mohamed |
Year Found | 2018 |
Location Found | Philadelphia, PA USA |
Finding Institution | Drexel University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 19°C |
GPS Coordinates | 39.9585 N, 75.1891 W Map |
Discovery Notes | The soil sample was found in an area near a sidewalk. There was grass surrounding the general area where this sample was dug up, and a bush was located nearby. The soil was damp as a result of the precipitation from earlier in the day. |
Naming Notes | One of our friends consistently mispronounced Riyaz's name, always enunciating the vowels and saying it in weird ways. We eventually told him how it was properly said, but he decided to keep saying the incorrect name. The name eventually became a joke between us and our roommates, so we decided to make it the name of this phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 2, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1834 |
Genome length (bp) | 41812 |
Character of genome ends | Circularly Permuted |
GC Content | 63.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Drexel University |
Annotation Status | In GenBank |
Plaque Notes | The phage appeared to be turbid. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK620895 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
82 |
Pitt Freezer Box Grid# |
B5 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |