Detailed Information for Phage SJay |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Megan Ulbrich |
Year Found | 2017 |
Location Found | Pitsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.44693 N, 79.953946 W Map |
Discovery Notes | Phage SJay was isolated from fine but moist soil collected in the Pittsburgh area. |
Naming Notes | SJay was named after a great friend of mine called Sarah Johnson. Growing up we called her SJ. She is a hilarious and kind-hearted individual. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 605 |
Genome length (bp) | 41847 |
Character of genome ends | Circularly Permuted |
GC Content | 63.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Collin College |
Annotation Status | In GenBank |
Plaque Notes | Stay plaques are clear and range in size from 1mm to ~4mm. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ958749 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
7 |
Pitt Freezer Box Grid# |
A1 |
Available Files |
GenBank File for Phamerator | Download |