Detailed Information for Phage Sillytadpoles |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Former names | TadpoleRx |
Found By | Ainsley Brockman, Maria Cervantes |
Year Found | 2022 |
Location Found | Spokane, WA United Staes |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.666811 N, 117.402937 W Map |
Discovery Notes | The sample was collected from moss growing from a sewer. The wet moss was attached to some dark brown dirt. Moss was a dark green and soft. |
Naming Notes | We started off with the word tadpole since bacteriophages look a lot like tadpoles. Then to add some fun into it we put the word silly in front of tadpoles. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 30, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 295 |
Genome length (bp) | 61494 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 201 bp |
GC Content | 67.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EG |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Gonzaga University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | The plaques are incredibly small and circular. They look clear in the middle with cloudy halo edges. |
Morphotype | Siphoviridae |
Number of Genes | 111 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
165 |
Pitt Freezer Box Grid# |
G3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |