| Detailed Information for Phage Squircle | |
| Discovery Information | |
| Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
| Found By | Noelle McDonald |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.43826 N, 79.912968 W Map |
| Discovery Notes | Found next to a sidewalk under leaves and grass clippings. Plaque picture is after one day incubation. Annotated by Sophia Sliter-Hays. |
| Naming Notes | Named after the shape |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 14, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 6791 |
| Genome length (bp) | 39091 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCTCCGGGTA |
| GC Content | 68.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EB |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAbigail Albedo Albright AnnaLie Armstrong Arroyo AvGardian Avocadoman BabyDaisy BabyYoda Bachaco BAjuniper BelmontSKP Bernstein Brahms BubbaBear Buldak Burritobowl Cashington Celaena ChiliPepper Clayda5 CliffHanger Coltrane CroZenni DickRichards Didgeridoo DirtyBubble Dismas Doobus Eden Elva Eula Finalfrontier FlameThrower Franklin22 Gack Icarian IndyLu Johnathan Jovita Kate33 Katzastrophic Kenzers Kieran Lahqtemish LimaBean Loviatar Lynlen Nicky22 Olliecat Phisb QMacho Quenya Rollins Rona SanaSana SansAfet SarBear Sharkboy Shayna Skylord Slay Squircle Stoor Stromboli SunnyD Swervy Teagster TukTuk Vitas WalkingDead |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 2/14/2025) |
| Plaque Notes | medium sized clear plaques |
| Number of Genes | 64 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSquircle_1 — tRNA Squircle_2 Squircle_3 Squircle_4 Squircle_5 Squircle_6 Squircle_7 Squircle_8 Squircle_9 Squircle_10 Squircle_11 Squircle_12 Squircle_13 Squircle_14 Squircle_15 Squircle_16 Squircle_17 Squircle_18 Squircle_19 Squircle_20 Squircle_21 Squircle_22 Squircle_23 Squircle_24 Squircle_25 Squircle_26 Squircle_27 Squircle_28 Squircle_29 Squircle_30 Squircle_31 Squircle_32 Squircle_33 Squircle_34 Squircle_35 Squircle_36 Squircle_37 Squircle_38 Squircle_39 Squircle_40 Squircle_41 Squircle_42 Squircle_43 Squircle_44 Squircle_45 Squircle_46 Squircle_47 Squircle_48 Squircle_49 Squircle_50 Squircle_51 Squircle_52 Squircle_53 Squircle_54 Squircle_55 Squircle_56 Squircle_57 Squircle_58 Squircle_59 Squircle_60 Squircle_61 Squircle_62 Squircle_63 Squircle_64 Squircle_65 — tRNA Squircle_66 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |