Detailed Information for Phage StirfryIV |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Jasmine Opara |
Year Found | 2021 |
Location Found | Amherst, MA USA |
Finding Institution | University of Massachusetts Amherst |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 42.389036 N, 72.522901 W Map |
Discovery Notes | In the Franklin Permaculture Garden at the University of Massachusetts, Amherst, in soil next to the garden sign. |
Naming Notes | The sample the phage came from was found at the Franklin Dining Common, known for its amazing stirfry. The IV came from the amount of people in our lab group. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 6, 2023 |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 37482 |
Genome length (bp) | 41519 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Massachusetts Amherst |
Annotation Status | In GenBank |
Plaque Notes | Average 3.5 mm diameter plaques, cloudy, regular edges (well defined). Clear surrounded by large halo. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ362681 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
135 |
Pitt Freezer Box Grid# |
B10 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |