The Actinobacteriophage Database | Phage StrawberryJamm

Microbacterium phage StrawberryJamm

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Detailed Information for Phage StrawberryJamm
Discovery Information
Isolation Host	Microbacterium foliorum NRRL B-24224
Found By	Jenny Albert and Melina Monlux
Year Found	2017
Location Found	Spokane, WA USA
Finding Institution	Gonzaga University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	25°C
GPS Coordinates	47.66749 N, 117.404954 W Map
Naming Notes	our initials :)
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 30, 2020
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	224
Genome length (bp)	61953
Character of genome ends	Direct Terminal Repeat
Direct Terminal Repeat Length	198 bp
GC Content	67.0%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	EG
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Altheas AluminumJesus BabyDotz BirdInFrench Blab CandC Casend DonaldDuck EverythinBagel Fizzles FrankDeliGuy Fransoyer Fregley Gazebo Grassboy Hyperion Jehoshaphat Judebell Kelcole Kyva Llemily Lonelysoil Marcie Mashley MorillMayhem Namago Nike OneinaGillian Pepe25 Phabia Phinky Quammi RobinRose Romm Rowlf RubyRalph Rudy SadLad SallyK Sillytadpoles Squash Statler StrawberryJamm Teehee Tempo Tissue Viceroy Wayne3 Wheelie Wilca Zagie Zhafia
Annotating Institution	Gonzaga University
Annotation Status	In GenBank
Plaque Notes	typically small about 2mm in diameter and cloudy
Number of Genes	112
Number of tRNAs	1
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View StrawberryJamm_1 StrawberryJamm_2 StrawberryJamm_3 StrawberryJamm_4 StrawberryJamm_5 StrawberryJamm_6 StrawberryJamm_7 StrawberryJamm_8 StrawberryJamm_9 StrawberryJamm_10 StrawberryJamm_11 (PnuC-like nicotinamide riboside transporter) StrawberryJamm_12 (DprA-like DNA processing chain A) StrawberryJamm_13 StrawberryJamm_14 StrawberryJamm_15 (helix-turn-helix DNA binding domain protein) StrawberryJamm_16 (helix-turn-helix DNA binding domain protein) StrawberryJamm_17 (ribbon-helix-helix DNA binding domain protein) StrawberryJamm_18 (helix-turn-helix DNA binding domain protein) StrawberryJamm_19 StrawberryJamm_20 StrawberryJamm_21 (ribbon-helix-helix DNA binding domain protein) StrawberryJamm_22 (terminase) StrawberryJamm_23 StrawberryJamm_24 (portal protein) StrawberryJamm_25 (capsid maturation protease and MuF-like fusion protein) StrawberryJamm_26 StrawberryJamm_27 (major capsid hexamer protein) StrawberryJamm_28 StrawberryJamm_29 StrawberryJamm_30 (major tail protein) StrawberryJamm_31 StrawberryJamm_32 (phosphoesterase) StrawberryJamm_33 (head-to-tail adaptor) StrawberryJamm_34 StrawberryJamm_35 StrawberryJamm_36 (tail assembly chaperone) StrawberryJamm_37 (tail assembly chaperone) StrawberryJamm_38 (tape measure protein) StrawberryJamm_39 (minor tail protein) StrawberryJamm_40 (minor tail protein) StrawberryJamm_41 (minor tail protein) StrawberryJamm_42 StrawberryJamm_43 StrawberryJamm_44 StrawberryJamm_45 StrawberryJamm_46 StrawberryJamm_47 (endolysin) StrawberryJamm_48 StrawberryJamm_49 StrawberryJamm_50 StrawberryJamm_51 StrawberryJamm_52 StrawberryJamm_53 StrawberryJamm_54 (DNA recombinase) StrawberryJamm_55 (HNH endonuclease) StrawberryJamm_56 StrawberryJamm_57 (RuvC-like resolvase) StrawberryJamm_58 StrawberryJamm_59 StrawberryJamm_60 (MazG-like nucleotide pyrophosphohydrolase) StrawberryJamm_61 — tRNA (tRNA-Ser(gga)) StrawberryJamm_62 (ssDNA binding protein) StrawberryJamm_63 StrawberryJamm_64 StrawberryJamm_65 StrawberryJamm_66 StrawberryJamm_67 StrawberryJamm_68 StrawberryJamm_69 StrawberryJamm_70 StrawberryJamm_71 StrawberryJamm_72 StrawberryJamm_73 StrawberryJamm_74 (DNA primase/helicase) StrawberryJamm_75 StrawberryJamm_76 StrawberryJamm_77 StrawberryJamm_78 StrawberryJamm_79 StrawberryJamm_80 StrawberryJamm_81 StrawberryJamm_82 StrawberryJamm_83 StrawberryJamm_84 StrawberryJamm_85 StrawberryJamm_86 StrawberryJamm_87 StrawberryJamm_88 StrawberryJamm_89 StrawberryJamm_90 StrawberryJamm_91 StrawberryJamm_92 StrawberryJamm_93 StrawberryJamm_94 StrawberryJamm_95 StrawberryJamm_96 StrawberryJamm_97 StrawberryJamm_98 StrawberryJamm_99 StrawberryJamm_100 StrawberryJamm_101 StrawberryJamm_102 StrawberryJamm_103 StrawberryJamm_104 StrawberryJamm_105 StrawberryJamm_106 StrawberryJamm_107 StrawberryJamm_108 StrawberryJamm_109 StrawberryJamm_110 StrawberryJamm_111 StrawberryJamm_112 StrawberryJamm_113
Submitted Minimal DNA Master File	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MW712724
Refseq Number	None yet
Published in Paper	Hoag et al 2022, Microbiology Resource Announcements: Genome Sequences of Microbacterium foliorum Bacteriophages StrawberryJamm, Quammi, Teehee, and Casend
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	65
Pitt Freezer Box Grid#	F6
Available Files
GenBank File for Phamerator	Download

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