Detailed Information for Phage Superfresh |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Duplicates of this Phage | Burly |
Found By | Audrey Jonas |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.438992 N, 79.951679 W Map |
Discovery Notes | Soil was taken from a fertile flower garden in South Oakland that is watered daily. Temperature was about 28 degrees Celsius. |
Naming Notes | "Superfresh" is the nickname of my remarkable best friend, given to him when he studied abroad. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 28, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2414 |
Genome length (bp) | 41860 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are about 1 mm in diameter and clear with mildly haloed edges |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG839026 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
B11 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |