Detailed Information for Phage Symere |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Ethan Zaayenga |
Year Found | 2024 |
Location Found | Monmouth, IL United States |
Finding Institution | Monmouth College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 18°C |
GPS Coordinates | 40.545332 N, 90.373781 W Map |
Discovery Notes | I collected around 80 mL of soil from the Monmouth College farm. The soil is from 0 to 6 inches deep and was a bit moist the morning I dug for it. I chose to dig on a compost pile right after it rained in order to give myself the best chance to capture a phage. |
Naming Notes | My roommate and I were talking about what to name my phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5159 |
Genome length (bp) | 41515 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Monmouth College |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | All of my morphologies were very cloudy and never had distinct edges. My plaques were somewhat small, around 2mm, and were spaced out from each other. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |