| Detailed Information for Phage TatarkaPM |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Duplicates of this Phage | FrankAM |
| Found By | Kayden Tatarka and Phillip Marques |
| Year Found | 2019 |
| Location Found | Amherst, MA United States |
| Finding Institution | University of Massachusetts Amherst |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 42.3894 N, 72.5232 W Map |
| Discovery Notes | Found in a compost pile |
| Naming Notes | The name is a combination of the names of the two people that discovered it. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 9, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1900 |
| Genome length (bp) | 41813 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EA |
| Subcluster | EA1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Massachusetts Amherst |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques formed consist of a small, fully lysed spot in the middle surrounded by a large, cloudy area. It is most likely a temperate phage. |
| Number of Genes | 63 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT771350 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
97 |
| Pitt Freezer Box Grid# |
F10 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
