Detailed Information for Phage Tinyman4 |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Jacob Barnett |
Year Found | 2022 |
Location Found | Amherst, MA United States of America |
Finding Institution | University of Massachusetts Amherst |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 42.3894 N, 72.5234 W Map |
Discovery Notes | Discovered in the grass near Clark Hall on the UMass Amherst campus. |
Naming Notes | We were brainstorming names and everyone ended up agreeing on Tinyman. We added the number 4 at the end because we are group 4. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 31, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2781 |
Genome length (bp) | 39403 |
Character of genome ends | Circularly Permuted |
GC Content | 64.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA11 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Massachusetts Amherst |
Annotation Status | In GenBank |
Plaque Notes | 2-4 mm, halo morphology as they are cloudy around the edges and clear in the middle. |
Morphotype | Siphoviridae |
Number of Genes | 59 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR553906 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
159 |
Pitt Freezer Box Grid# |
A6 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |