Detailed Information for Phage Velene |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Gelene Rivera & Victor Austin |
Year Found | 2018 |
Location Found | Kenosha, WI USA |
Finding Institution | Carthage College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 42.62436 N, 87.82 W Map |
Discovery Notes | We adopted a phage from Alejandra Vasquez and Emma Bone from our Phage Hunter's class. They retrieved the soil from a flower bed on Carthage College's campus. |
Naming Notes | Victor and Gelene put their names together in order to form "Velene". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 15, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2214 |
Genome length (bp) | 41798 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Carthage College |
Annotation Status | In GenBank |
Plaque Notes | The plaque was consistently clear, with about a 2 millimeter diameter within each dilution. |
Morphotype | Siphoviridae |
Number of Genes | 63 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK967388 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
77 |
Pitt Freezer Box Grid# |
G5 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |