| Detailed Information for Phage Ailee |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Khusbu Patel |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.445603 N, 79.960464 W Map |
| Discovery Notes | Weather conditions at time of acquisition: overcast, 7 mph winds, 42 degrees F
Weather conditions in 24 hours prior to acquisition: overcast, 5-10 mph winds, warmed up very slightly from 37-39 degrees F at night to 40-42 degrees F during the daytime
Soil conditions: soil was moist, soft, dark in color, and contained many roots that were intertwined with one another |
| Naming Notes | Ailee is the stage name of my favorite K-pop artist. (Her voice is amazing!) |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 10, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 700 |
| Genome length (bp) | 58474 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are generally large and circular. The size of the plaques is not very sensitive to slight variations in agar thickness. |
| Morphotype | Siphoviridae |
| Number of Genes | 83 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH976507 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
55 |
| Pitt Freezer Box Grid# |
B11 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
