Gordonia phage McKinley
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Detailed Information for Phage McKinley
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByMitchell Golas
Year Found2018
Location FoundFarmington, ME USA
Finding InstitutionUniversity of Maine, Farmington
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature24°C
GPS Coordinates44.664833 N, 70.147389 W Map
Discovery NotesLocated after a rain storm in the site of a road run off, across form a gas station. Collection details: 75 Degrees F and Sunny. Post collection :on 9/7/18 storage was achieved in a 50 ml conical tube at 0 degrees C for 2 days, before isolation process was initiated.
Naming NotesNamed after my Loyal Dog Mckinley following his passing September 27 2018
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1066
Genome length (bp)59022
Character of genome endsCircularly Permuted
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maine, Farmington
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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McKinley_1
(terminase small subunit)

McKinley_2
(terminase large subunit)

McKinley_3

McKinley_4

McKinley_5
(DNA methylase)

McKinley_6

McKinley_7

McKinley_8
(MerR-like helix-turn-helix DNA binding domain protein)

McKinley_9

McKinley_10

McKinley_11
(lipoprotein)

McKinley_12

McKinley_13
(portal protein)

McKinley_14

McKinley_15

McKinley_16
(MuF-like minor capsid protein)

McKinley_17

McKinley_18
(capsid maturation protease)

McKinley_19

McKinley_20

McKinley_21
(major capsid protein)

McKinley_22

McKinley_23

McKinley_24
(major tail protein)

McKinley_25

McKinley_26

McKinley_27

McKinley_28
(minor tail protein)

McKinley_29
(head-to-tail adaptor)

McKinley_30

McKinley_31

McKinley_32

McKinley_33
(tail assembly chaperone)

McKinley_34
(tail assembly chaperone)

McKinley_35
(tape measure protein)

McKinley_36
(minor tail protein)

McKinley_37
(minor tail protein)

McKinley_38
(HNH endonuclease)

McKinley_39

McKinley_40
(minor tail protein)

McKinley_41

McKinley_42

McKinley_43
(lysin A)

McKinley_44

McKinley_45

McKinley_46

McKinley_47
(lysin B)

McKinley_48

McKinley_49

McKinley_50
(RecE-like exonuclease)

McKinley_51

McKinley_52

McKinley_53

McKinley_54
(RecT-like ssDNA binding protein)

McKinley_55

McKinley_56

McKinley_57
(helix-turn-helix DNA binding domain protein)

McKinley_58
(helix-turn-helix DNA binding domain protein)

McKinley_59

McKinley_60

McKinley_61

McKinley_62

McKinley_63

McKinley_64

McKinley_65

McKinley_66

McKinley_67

McKinley_68

McKinley_69
(RuvC-like resolvase)

McKinley_70

McKinley_71

McKinley_72

McKinley_73

McKinley_73

McKinley_74

McKinley_75

McKinley_76

McKinley_77

McKinley_78

McKinley_79

McKinley_80

McKinley_81

McKinley_82

McKinley_83

McKinley_84

McKinley_85

McKinley_86
(helix-turn-helix DNA binding domain protein)

McKinley_87
(DNA methylase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK977702
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 78
Pitt Freezer Box Grid# A9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload