Gordonia phage Fitzgerald
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Detailed Information for Phage Fitzgerald
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDaniel Methven
Year Found2020
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4397 N, 79.9437 W Map
Discovery NotesPhage Fitzgerald was isolated by Daniel Methven, who worked in a team with Jenna Peretin, Adithya Sreenvias, and Macaiah Thaxton. The soil sample from which it was isolated was collected from the side of Schenley Drive near Panther Hollow in Pittsburgh, Pennsylvania. The soil was very moist and had some sticks and decay present.
Naming NotesThe name "Fitzgerald" was suggested by a friend of our teammate, and we liked the originality of it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 20, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage578
Genome length (bp)58988
Character of genome endsCircularly Permuted
GC Content67.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Fitzgerald_1
(terminase, small subunit)

Fitzgerald_2
(terminase, large subunit)

Fitzgerald_3

Fitzgerald_4
(DNA methylase)

Fitzgerald_5

Fitzgerald_6

Fitzgerald_7
(helix-turn-helix DNA binding domain)

Fitzgerald_8

Fitzgerald_9
(lipoprotein)

Fitzgerald_10

Fitzgerald_11
(portal protein)

Fitzgerald_12

Fitzgerald_13
(MuF-like minor capsid protein)

Fitzgerald_14
(ribosome modulation factor)

Fitzgerald_15
(RNA ligase)

Fitzgerald_16

Fitzgerald_17

Fitzgerald_18
(major capsid protein)

Fitzgerald_19

Fitzgerald_20

Fitzgerald_21
(major tail protein)

Fitzgerald_22
(hydrolase)

Fitzgerald_23
(esterase)

Fitzgerald_24
(glucosaminyl deacetylase)

Fitzgerald_25
(head-to-tail adaptor)

Fitzgerald_26

Fitzgerald_27

Fitzgerald_28

Fitzgerald_29
(tail assembly chaperone)

Fitzgerald_30

Fitzgerald_31
(tape measure protein)

Fitzgerald_32
(minor tail protein)

Fitzgerald_33
(minor tail protein)

Fitzgerald_34

Fitzgerald_35
(minor tail protein)

Fitzgerald_36

Fitzgerald_37

Fitzgerald_38
(minor tail protein)

Fitzgerald_39

Fitzgerald_40
(lysin A)

Fitzgerald_41
(holin)

Fitzgerald_42

Fitzgerald_43

Fitzgerald_44
(lysin B)

Fitzgerald_45

Fitzgerald_46

Fitzgerald_47
(Cas4 family exonuclease)

Fitzgerald_48

Fitzgerald_49

Fitzgerald_50
(RecT-like ssDNA binding protein)

Fitzgerald_51

Fitzgerald_52

Fitzgerald_53
(helix-turn-helix DNA binding domain)

Fitzgerald_54
(RepA-like replication initiator)

Fitzgerald_55

Fitzgerald_56

Fitzgerald_57

Fitzgerald_58

Fitzgerald_59

Fitzgerald_60

Fitzgerald_61

Fitzgerald_62

Fitzgerald_63

Fitzgerald_64

Fitzgerald_65

Fitzgerald_66

Fitzgerald_67
(RuvC-like resolvase)

Fitzgerald_68

Fitzgerald_69

Fitzgerald_70

Fitzgerald_71

Fitzgerald_72

Fitzgerald_73

Fitzgerald_74

Fitzgerald_75

Fitzgerald_76
(DNA binding protein)

Fitzgerald_77

Fitzgerald_78

Fitzgerald_79

Fitzgerald_80

Fitzgerald_81

Fitzgerald_82
(helix-turn-helix DNA binding domain)

Fitzgerald_83
(DNA methylase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ322015
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 125
Pitt Freezer Box Grid# D5
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload