Gordonia phage Galadriel
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Detailed Information for Phage Galadriel
Discovery Information
Isolation HostGordonia terrae 3612
Found ByKenna Kita
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.445194 N, 79.953444 W Map
Discovery NotesThe soil where this phage was found was taken from outside of the Cathedral of Learning at the University of Pittsburgh on 9/10/18. The soil felt very damp. The weather conditions were rainy and cold. There were lots of bushes around the area.
Naming NotesGaladriel is one of my favorite characters from Lord of the Rings
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage698
Genome length (bp)59400
Character of genome endsCircularly Permuted
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThis phage seems to form plaques of two distinct sizes, medium (around 2mm) and tiny plaques (less than 1mm). The plaques are clear, indicating this is a virulent phage.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Galadriel_1
(helix-turn-helix DNA binding domain protein)

Galadriel_2
(terminase)

Galadriel_3

Galadriel_4

Galadriel_5

Galadriel_6

Galadriel_7

Galadriel_8

Galadriel_9
(MerR-like helix-turn-helix DNA binding domain protein)

Galadriel_10

Galadriel_11
(methyltransferase)

Galadriel_12
(lipoprotein)

Galadriel_13

Galadriel_14
(portal protein)

Galadriel_15

Galadriel_16
(MuF-like minor capsid protein)

Galadriel_17

Galadriel_18
(capsid maturation protease)

Galadriel_19

Galadriel_20
(HNH endonuclease)

Galadriel_21

Galadriel_22
(major capsid protein)

Galadriel_23

Galadriel_24

Galadriel_25
(major tail protein)

Galadriel_26

Galadriel_27
(head-to-tail adaptor)

Galadriel_28

Galadriel_29

Galadriel_30

Galadriel_31
(tail assembly chaperone)

Galadriel_32

Galadriel_33
(tape measure protein)

Galadriel_34
(minor tail protein)

Galadriel_35
(minor tail protein)

Galadriel_36
(HNH endonuclease)

Galadriel_37

Galadriel_38
(minor tail protein)

Galadriel_39

Galadriel_40

Galadriel_41
(lysin A)

Galadriel_42

Galadriel_43

Galadriel_44

Galadriel_45
(lysin B)

Galadriel_46

Galadriel_47

Galadriel_48
(RecE-like exonuclease)

Galadriel_49

Galadriel_50

Galadriel_51

Galadriel_52
(RecT-like ssDNA binding protein)

Galadriel_53

Galadriel_54

Galadriel_55
(helix-turn-helix DNA binding domain protein)

Galadriel_56
(DNA binding protein)

Galadriel_57
(DNA binding protein)

Galadriel_58

Galadriel_59

Galadriel_60

Galadriel_61

Galadriel_62

Galadriel_63

Galadriel_64

Galadriel_65

Galadriel_66

Galadriel_67

Galadriel_68
(RuvC-like resolvase)

Galadriel_69

Galadriel_70

Galadriel_71

Galadriel_72

Galadriel_73

Galadriel_74

Galadriel_75

Galadriel_76

Galadriel_77

Galadriel_78
(DNA binding protein)

Galadriel_79

Galadriel_80

Galadriel_81

Galadriel_82

Galadriel_83

Galadriel_84

Galadriel_85
(helix-turn-helix DNA binding domain protein)

Galadriel_86
(DNA methylase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK937594
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 90
Pitt Freezer Box Grid# B11
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload