Gordonia phage Fosterous
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Detailed Information for Phage Fosterous
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRafael Alexandre
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates40.4439 N, 79.9561 W Map
Discovery NotesThe soil that Fosterous was found in was in muddy and wet. This soil was in a flower bed and was mixed with fertilizer, mulch, and leaves. It was a 60 degree Fahrenheit afternoon.
Naming NotesSince I adopted this phage, it is a "foster" phage, hence "Fosterous".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 18, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage953
Genome length (bp)59136
Character of genome endsCircularly Permuted
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Lysogeny NotesSince Fosterous is able to produce cloudy plaques in addition to clear plaques, it can be concluded that Fosterous is a temperate phage that produces lysogens.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThe plaques produced by Fosterous can be either large, round, and cloudy or small and clear. Their sizes can range from 1mm to 3.5 mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH976510
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 55
Pitt Freezer Box Grid# F10
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload