Gordonia phage BlingBling
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Detailed Information for Phage BlingBling
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAyla Brody
Year Found2019
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.443889 N, 79.950639 W Map
Discovery NotesGround was dry, no layer of mulch, semi-vegetated, dirt was bare. Soil was collected from outside the main entrance to the Carnegie Library of Pittsburgh-Main (Oakland) location.
Naming NotesNamed in memoriam
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3357
Genome length (bp)48746
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCGGTGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCollege of Southern Nevada
Annotation StatusIn GenBank
Plaque NotesPlaque morphology is turbid, with inner halos noted. Plaques have clear centers, with multiple rings of varying turbidity per plaque.
Has been Phamerated?Yes
Gene List

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BlingBling_1
(terminase small subunit)

BlingBling_2
(terminase large subunit)

BlingBling_3
(portal protein)

BlingBling_4
(capsid maturation protease)

BlingBling_5
(scaffolding protein)

BlingBling_6
(major capsid protein)

BlingBling_7

BlingBling_8
(head-to-tail adaptor)

BlingBling_9
(head-to-tail stopper)

BlingBling_10

BlingBling_11

BlingBling_12

BlingBling_13
(tail terminator)

BlingBling_14
(major tail protein)

BlingBling_15
(tail assembly chaperone)

BlingBling_16
(tail assembly chaperone)

BlingBling_17
(tape measure protein)

BlingBling_18
(minor tail protein)

BlingBling_19
(minor tail protein)

BlingBling_20
(lysin A, L-Ala-D-Glu peptidase domain)

BlingBling_21
(lysin A, glycosyl hydrolase domain)

BlingBling_22
(holin)

BlingBling_23

BlingBling_24

BlingBling_25
(lysin B)

BlingBling_26

BlingBling_27
(minor tail protein)

BlingBling_28
(minor tail protein)

BlingBling_29

BlingBling_30
(minor tail protein)

BlingBling_31

BlingBling_32

BlingBling_33
(tyrosine integrase)

BlingBling_34

BlingBling_35
(excise)

BlingBling_36

BlingBling_37
(tyrosine integrase)

BlingBling_38

BlingBling_39
(immunity repressor)

BlingBling_40

BlingBling_41
(helix-turn-helix DNA binding domain protein)

BlingBling_42

BlingBling_43

BlingBling_44

BlingBling_45

BlingBling_46

BlingBling_47

BlingBling_48
(helix-turn-helix DNA binding domain protein)

BlingBling_49

BlingBling_50

BlingBling_51

BlingBling_52

BlingBling_53

BlingBling_54
(exonuclease)

BlingBling_55
(RecT-like ssDNA binding protein)

BlingBling_56

BlingBling_57

BlingBling_58

BlingBling_59

BlingBling_60

BlingBling_61

BlingBling_62
(DNA methylase)

BlingBling_63

BlingBling_64

BlingBling_65

BlingBling_66
(HNH endonuclease)

BlingBling_67

BlingBling_68

BlingBling_69

BlingBling_70
(RuvC-like resolvase)

BlingBling_71

BlingBling_72
(helix-turn-helix DNA binding domain protein)

BlingBling_73

BlingBling_74

BlingBling_75

BlingBling_76
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT553336
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload