Gordonia phage Hitter
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Detailed Information for Phage Hitter
Discovery Information
Isolation HostGordonia terrae 3612
Found ByEnrique Garcia-Assad
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.434668 N, 79.952122 W Map
Discovery NotesFound in a sample taken from a tree-lined median in the middle of a residential street.
Naming NotesNamed after a song by artist Travis Scott called "Highest in the Room"
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2168
Genome length (bp)47297
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCGGTGA
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusOverdue (Expected completion by 5/15/2020)
Plaque NotesClearings are turbid - clear in appearance (more turbid in lower concentrations), and circular measuring about 2-3 mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload