Gordonia phage ZiggyZoo
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage ZiggyZoo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLiz Timple and Cassandra Paterson
Year Found2019
Location FoundMonroeville, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4295 N, 79.7851 W Map
Discovery NotesThe soil sample was very moist due to rainfall the night before collection. The humidity at the time of collection was 87% and it was 22 degrees celsius outside.
Naming NotesNickname for Cassandra's old dog
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1856
Genome length (bp)50992
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCGGTGA
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMerrimack College
Annotation StatusIn GenBank
Plaque NotesClear, circular plaques ranging in size; edges look turbid when plaques overlap/webbed
Has been Phamerated?Yes
Gene List

Click to View

ZiggyZoo_1
(terminase, small subunit)

ZiggyZoo_2
(terminase, large subunit)

ZiggyZoo_3
(portal protein)

ZiggyZoo_4
(capsid maturation protease)

ZiggyZoo_5
(scaffolding protein)

ZiggyZoo_6
(major capsid protein)

ZiggyZoo_7

ZiggyZoo_8
(head-to-tail adaptor)

ZiggyZoo_9
(head-to-tail stopper)

ZiggyZoo_10

ZiggyZoo_11

ZiggyZoo_12
(tail terminator)

ZiggyZoo_13
(major tail protein)

ZiggyZoo_14
(tail assembly chaperone)

ZiggyZoo_15
(tail assembly chaperone)

ZiggyZoo_16
(tape measure protein)

ZiggyZoo_17
(minor tail protein)

ZiggyZoo_18
(minor tail protein)

ZiggyZoo_19
(lysin A, L-Ala-D-Glu peptidase domain)

ZiggyZoo_20
(lysin A, glycosyl hydrolase domain)

ZiggyZoo_21
(holin)

ZiggyZoo_22

ZiggyZoo_23

ZiggyZoo_24

ZiggyZoo_25
(lysin B)

ZiggyZoo_26

ZiggyZoo_27

ZiggyZoo_28
(minor tail protein)

ZiggyZoo_29

ZiggyZoo_30

ZiggyZoo_31
(glucosaminyl deacetylase)

ZiggyZoo_32

ZiggyZoo_33

ZiggyZoo_34

ZiggyZoo_35

ZiggyZoo_36

ZiggyZoo_37

ZiggyZoo_38
(serine integrase)

ZiggyZoo_39
(helix-turn-helix DNA binding protein)

ZiggyZoo_40
(helix-turn-helix DNA binding domain)

ZiggyZoo_41

ZiggyZoo_42
(serine/threonine kinase)

ZiggyZoo_43
(immunity repressor)

ZiggyZoo_44

ZiggyZoo_45

ZiggyZoo_46
(antirepressor)

ZiggyZoo_47

ZiggyZoo_48

ZiggyZoo_49

ZiggyZoo_50

ZiggyZoo_51

ZiggyZoo_52

ZiggyZoo_53

ZiggyZoo_54

ZiggyZoo_55

ZiggyZoo_56

ZiggyZoo_57

ZiggyZoo_58
(Cas4 family exonuclease)

ZiggyZoo_59
(RecT-like ss DNA binding protein)

ZiggyZoo_60

ZiggyZoo_61

ZiggyZoo_62

ZiggyZoo_63

ZiggyZoo_64

ZiggyZoo_65

ZiggyZoo_66

ZiggyZoo_67

ZiggyZoo_68

ZiggyZoo_69
(methyltransferase)

ZiggyZoo_70

ZiggyZoo_71

ZiggyZoo_72

ZiggyZoo_73

ZiggyZoo_74

ZiggyZoo_75

ZiggyZoo_76
(RuvC-like resolvase)

ZiggyZoo_77

ZiggyZoo_78

ZiggyZoo_79

ZiggyZoo_80
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW601225
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2E11
Pitt Freezer Box# 115
Pitt Freezer Box Grid# F3
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload