| Detailed Information for Phage Fairfaxidum | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Adam Persello |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.444449 N, 79.952562 W Map |
| Discovery Notes | During the time the soil was collected, the weather was above freezing and humid. The temperature was about 45 degrees and it was cloudy. This made it quite easy to scoop up the dirt. |
| Naming Notes | Name from childhood street. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 18, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 2030 |
| Genome length (bp) | 50187 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCGCCGGTGA |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CV |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotation Status | Being Annotated (Expected completion by 5/15/2019) |
| Plaque Notes | Plaques tend to be medium sized (~1-2mm) and are somewhat cloudy. Sometimes the plaques vary somewhat in size. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewFairfaxidum_1 Fairfaxidum_2 Fairfaxidum_3 Fairfaxidum_4 Fairfaxidum_5 Fairfaxidum_6 Fairfaxidum_7 Fairfaxidum_8 Fairfaxidum_9 Fairfaxidum_10 Fairfaxidum_11 Fairfaxidum_12 Fairfaxidum_13 Fairfaxidum_14 Fairfaxidum_15 Fairfaxidum_16 Fairfaxidum_17 Fairfaxidum_18 Fairfaxidum_19 Fairfaxidum_20 Fairfaxidum_21 Fairfaxidum_22 Fairfaxidum_23 Fairfaxidum_24 Fairfaxidum_25 Fairfaxidum_26 Fairfaxidum_27 Fairfaxidum_28 Fairfaxidum_29 Fairfaxidum_30 Fairfaxidum_31 Fairfaxidum_32 Fairfaxidum_33 Fairfaxidum_34 Fairfaxidum_35 Fairfaxidum_36 Fairfaxidum_37 Fairfaxidum_38 Fairfaxidum_39 Fairfaxidum_40 Fairfaxidum_41 Fairfaxidum_42 Fairfaxidum_43 Fairfaxidum_44 Fairfaxidum_45 Fairfaxidum_46 Fairfaxidum_47 Fairfaxidum_48 Fairfaxidum_49 Fairfaxidum_50 Fairfaxidum_51 Fairfaxidum_52 Fairfaxidum_53 Fairfaxidum_54 Fairfaxidum_55 Fairfaxidum_56 Fairfaxidum_57 Fairfaxidum_58 Fairfaxidum_59 Fairfaxidum_60 Fairfaxidum_61 Fairfaxidum_62 Fairfaxidum_63 Fairfaxidum_64 Fairfaxidum_65 Fairfaxidum_66 Fairfaxidum_67 Fairfaxidum_68 Fairfaxidum_69 Fairfaxidum_70 Fairfaxidum_71 Fairfaxidum_72 Fairfaxidum_73 Fairfaxidum_74 Fairfaxidum_75 Fairfaxidum_76 Fairfaxidum_77 Fairfaxidum_78 Fairfaxidum_79 Fairfaxidum_80 Fairfaxidum_81 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 55 |
| Pitt Freezer Box Grid# | F8 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
