Gordonia phage MintFen
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Detailed Information for Phage MintFen
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByJamie Smith
Year Found2018
Location FoundQueens, NY USA
Finding InstitutionNyack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.733056 N, 73.82 W Map
Discovery NotesFound in Queens, NY in my grandmothers mint garden.
Naming NotesThis phage's name was chosen because it is dedicated to my grandmother. She had chosen the location where the sample was taken. Her name is Liu Wu Min Fen (her Chinese name), so I used her sir name "Fen" and her first name and combined the two. However, since this phage was found in her mint garden, I chose to replace her first name "Min" with "mint". Thus, coming up with the name, "MintFen".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 11, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1977
Genome length (bp)48512
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGGTGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNyack College
Annotation StatusIn GenBank
Plaque NotesTurbid plaque
Has been Phamerated?Yes
Gene List

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MintFen_1
(terminase small subunit)

MintFen_2
(terminase large subunit)

MintFen_3
(portal protein)

MintFen_4
(capsid maturation protease)

MintFen_5
(scaffolding protein)

MintFen_6
(major capsid protein)

MintFen_7

MintFen_8
(head-to-tail adaptor)

MintFen_9
(head-to-tail stopper)

MintFen_10

MintFen_11

MintFen_12

MintFen_13
(tail terminator)

MintFen_14
(major tail protein)

MintFen_15
(tail assembly chaperone)

MintFen_16
(tail assembly chaperone)

MintFen_17
(tape measure protein)

MintFen_18
(minor tail protein)

MintFen_19
(minor tail protein)

MintFen_20
(lysin A, L-Ala-D-Glu peptidase domain)

MintFen_21
(lysin A, glycosyl hydrolase domain)

MintFen_22
(holin)

MintFen_23

MintFen_24

MintFen_25
(lysin B)

MintFen_26
(minor tail protein)

MintFen_27
(minor tail protein)

MintFen_28
(minor tail protein)

MintFen_29
(minor tail protein)

MintFen_30
(minor tail protein)

MintFen_31
(acetyltransferase)

MintFen_32

MintFen_33

MintFen_34

MintFen_35
(RelB-like antitoxin)

MintFen_36
(RelE-like toxin)

MintFen_37

MintFen_38
(helix-turn-helix DNA binding domain protein)

MintFen_39

MintFen_40
(tyrosine integrase)

MintFen_41

MintFen_42
(immunity repressor)

MintFen_43

MintFen_44

MintFen_45

MintFen_46

MintFen_47

MintFen_48
(DNA binding protein)

MintFen_49

MintFen_50

MintFen_51
(helix-turn-helix DNA binding domain protein)

MintFen_52
(DNA binding protein)

MintFen_53

MintFen_54
(DNA binding protein)

MintFen_55

MintFen_56

MintFen_57
(DNA polymerase III subunit)

MintFen_58
(RecE-like exonuclease)

MintFen_59
(RecT-like ssDNA binding protein)

MintFen_60

MintFen_61
(NKF membrane protein)

MintFen_62

MintFen_63

MintFen_64

MintFen_65

MintFen_66

MintFen_67

MintFen_68

MintFen_69

MintFen_70
(DNA binding protein)

MintFen_71
(helix-turn-helix DNA binding domain protein)

MintFen_72

MintFen_73

MintFen_74

MintFen_75
(RuvC-like resolvase)

MintFen_76
(DNA binding protein)

MintFen_77
(helix-turn-helix DNA binding domain protein)

MintFen_78

MintFen_79
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN010762
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 93
Pitt Freezer Box Grid# F7
Available Files
GenBank File for PhameratorDownload