Gordonia phage JuJu
JuJu Plaque Picture
JuJu EM Picture
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Detailed Information for Phage JuJu
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLauren Callewaert
Year Found2017
Location FoundPittsburgh, PA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.443889 N, 79.960833 W Map
Discovery NotesThe soil sample was collected from an area of dark, soft soil that had woodchips on top of the soil collected. There were also bushes growing around the area from which the soil was collected. The temperature was around 30 degrees Fahrenheit when it was collected.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 29, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage923
Genome length (bp)54000
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCollege of Charleston
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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JuJu_1
(terminase, small subunit)

JuJu_2
(terminase, large subunit)

JuJu_3
(portal protein)

JuJu_4
(capsid maturation protease)

JuJu_5
(scaffolding protein)

JuJu_6
(major capsid protein)

JuJu_7
(Hyopthetical Protein)

JuJu_8
(head-to-tail adaptor)

JuJu_9
(head-to-tail stopper)

JuJu_10
(Hyopthetical Protein)

JuJu_11
(Hyopthetical Protein)

JuJu_12
(Hyopthetical Protein)

JuJu_13
(tail terminator)

JuJu_14
(major tail protein)

JuJu_15
(tail assembly chaperone)

JuJu_16
(tail assembly chaperone)

JuJu_17
(tape measure protein)

JuJu_18
(minor tail protein)

JuJu_19
(minor tail protein)

JuJu_20
(lysin A, L-Ala-D-Glu peptidase domain)

JuJu_21
(lysin A, glycosyl hydrolase domain)

JuJu_22
(holin)

JuJu_23
(Hyopthetical Protein)

JuJu_24
(Hyopthetical Protein)

JuJu_25
(membrane protein)

JuJu_26
(lysin B)

JuJu_27
(Hyopthetical Protein)

JuJu_28
(minor tail protein)

JuJu_29
(minor tail protein)

JuJu_30
(Hyopthetical Protein)

JuJu_31
(Hyopthetical Protein)

JuJu_32
(hydrolase)

JuJu_33
(Hyopthetical Protein)

JuJu_34
(Hyopthetical Protein)

JuJu_35

JuJu_36
(Hyopthetical Protein)

JuJu_37
(antitoxin in toxin/antitoxin system, RelB-like)

JuJu_38
(toxin in toxin/antitoxin system, RelE-like)

JuJu_39
(Hyopthetical Protein)

JuJu_40
(Hyopthetical Protein)

JuJu_41
(serine integrase)

JuJu_42
(Hyopthetical Protein)

JuJu_43
(peptidase)

JuJu_44
(Hyopthetical Protein)

JuJu_45
(helix-turn-helix DNA binding domain)

JuJu_46
(Hyopthetical Protein)

JuJu_47
(immunity repressor)

JuJu_48
(Hyopthetical Protein)

JuJu_49
(Hyopthetical Protein)

JuJu_50
(antirepressor)

JuJu_51
(Hyopthetical Protein)

JuJu_52
(Hyopthetical Protein)

JuJu_53
(Hyopthetical Protein)

JuJu_54
(Hyopthetical Protein)

JuJu_55
(Hyopthetical Protein)

JuJu_56
(Hyopthetical Protein)

JuJu_57
(Hyopthetical Protein)

JuJu_58
(Hyopthetical Protein)

JuJu_59
(Hyopthetical Protein)

JuJu_60
(Hyopthetical Protein)

JuJu_61
(Hyopthetical Protein)

JuJu_62
(Hyopthetical Protein)

JuJu_63
(Hyopthetical Protein)

JuJu_64
(exonuclease)

JuJu_65
(RecT-like ssDNA binding protein)

JuJu_66
(Hyopthetical Protein)

JuJu_67
(Hyopthetical Protein)

JuJu_68
(Hyopthetical Protein)

JuJu_69
(Hyopthetical Protein)

JuJu_70
(Hyopthetical Protein)

JuJu_71
(membrane protein)

JuJu_72
(Hyopthetical Protein)

JuJu_73
(Hyopthetical Protein)

JuJu_74
(DNA methylase)

JuJu_75
(Hyopthetical Protein)

JuJu_76
(Hyopthetical Protein)

JuJu_77
(HNH endonuclease)

JuJu_78
(Hyopthetical Protein)

JuJu_79
(Hyopthetical Protein)

JuJu_80
(Hyopthetical Protein)

JuJu_81
(Hyopthetical Protein)

JuJu_82
(RuvC-like resolvase)

JuJu_83
(Hyopthetical Protein)

JuJu_84
(Hyopthetical Protein)

JuJu_85
(helix-turn-helix DNA binding domain)

JuJu_86
(Hyopthetical Protein)

JuJu_87
(Hyopthetical Protein)

JuJu_88
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN062704
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 55
Pitt Freezer Box Grid# G11
Available Files
Restriction Digest PictureDownload
GenBank File for PhameratorDownload