Detailed Information for Phage CarolAnn |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Kaitlyn Anderson |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.445 N, 79.954 W Map |
Discovery Notes | The soil from which the sample was collected was dark brown, almost black. It had recently rained, and soil felt moist to the touch. Location of soil was in a flower bed. Weather the day of collection was sunny and 75 degrees F. |
Naming Notes | Named after the discoverers Grandmother, Carol Ann. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 27, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1680 |
Genome length (bp) | 54167 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TGGCCGGTGA |
GC Content | 66.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CV |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques are transparent and less than 1 mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 80 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KX557275 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
2 |
Pitt Freezer Box Grid# |
D7 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |