Gordonia phage CarolAnn
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Detailed Information for Phage CarolAnn
Discovery Information
Isolation HostGordonia terrae 3612
Found ByKaitlyn Anderson
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.445 N, 79.954 W Map
Discovery NotesThe soil from which the sample was collected was dark brown, almost black. It had recently rained, and soil felt moist to the touch. Location of soil was in a flower bed. Weather the day of collection was sunny and 75 degrees F.
Naming NotesNamed after the discoverers Grandmother, Carol Ann.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1680
Genome length (bp)54167
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPlaques are transparent and less than 1 mm in diameter.
MorphotypeSiphoviridae
Number of Genes80
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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CarolAnn_1
(terminase small subunit)

CarolAnn_2
(terminase large subunit)

CarolAnn_3
(portal protein)

CarolAnn_4
(capsid maturation protease)

CarolAnn_5
(scaffolding protein)

CarolAnn_6
(major capsid protein)

CarolAnn_7

CarolAnn_8
(head-to-tail adaptor)

CarolAnn_9
(head-to-tail stopper)

CarolAnn_10

CarolAnn_11

CarolAnn_12

CarolAnn_13
(tail terminator)

CarolAnn_14
(major tail protein)

CarolAnn_15
(tail assembly chaperone)

CarolAnn_16
(tail assembly chaperone)

CarolAnn_17
(tape measure protein)

CarolAnn_18
(minor tail protein)

CarolAnn_19
(minor tail protein)

CarolAnn_20
(lysin A, L-Ala-D-Glu peptidase domain)

CarolAnn_21
(lysin A, glycosyl hydrolase domain)

CarolAnn_22
(holin)

CarolAnn_23

CarolAnn_24

CarolAnn_25

CarolAnn_26
(lysin B)

CarolAnn_27

CarolAnn_28
(minor tail protein)

CarolAnn_29
(minor tail protein)

CarolAnn_30

CarolAnn_31
(minor tail protein)

CarolAnn_32

CarolAnn_33

CarolAnn_34

CarolAnn_35

CarolAnn_36

CarolAnn_37

CarolAnn_38

CarolAnn_39

CarolAnn_40
(serine integrase)

CarolAnn_41

CarolAnn_42

CarolAnn_43

CarolAnn_44

CarolAnn_45
(immunity repressor)

CarolAnn_46
(helix-turn-helix DNA binding protein)

CarolAnn_47

CarolAnn_48
(antirepressor)

CarolAnn_49

CarolAnn_50

CarolAnn_51

CarolAnn_52

CarolAnn_53

CarolAnn_54

CarolAnn_55

CarolAnn_56

CarolAnn_57

CarolAnn_58

CarolAnn_59
(exonuclease)

CarolAnn_60
(RecT-like ssDNA binding protein)

CarolAnn_61

CarolAnn_62

CarolAnn_63

CarolAnn_64

CarolAnn_65

CarolAnn_66

CarolAnn_67

CarolAnn_68
(DNA methylase)

CarolAnn_69

CarolAnn_70

CarolAnn_71

CarolAnn_72

CarolAnn_73

CarolAnn_74

CarolAnn_75

CarolAnn_76
(RuvC-like resolvase)

CarolAnn_77

CarolAnn_78
(helix-turn-helix DNA binding protein)

CarolAnn_79

CarolAnn_80
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX557275
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# D7
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload