Detailed Information for Phage Casend |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Jill Townsend and Meghan Casey |
Year Found | 2017 |
Location Found | Spokane, WA USA |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 24°C |
GPS Coordinates | 47.671731 N, 117.402676 W Map |
Discovery Notes | Grown at 24°C |
Naming Notes | Mixed last names of the finders Meghan Casey and Jill Townsend |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2270 |
Genome length (bp) | 62461 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 204 bp |
GC Content | 66.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EG |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Gonzaga University |
Annotation Status | In GenBank |
Plaque Notes | Clear plaques that are circular in a size ranging from 2-5ml |
Number of Genes | 106 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT657333 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
64 |
Pitt Freezer Box Grid# |
C1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |