Detailed Information for Phage Chickadee |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Hannah Matthews, Maryann Rettig |
Year Found | 2021 |
Location Found | Caddo Valley, AR United States |
Finding Institution | Ouachita Baptist University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 34.179026 N, 93.079659 W Map |
Discovery Notes | It was found at a chicken coop in Caddo Valley. |
Naming Notes | It was named after the chicken coop where it was found. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 5, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 14602 |
Genome length (bp) | 56497 |
Character of genome ends | Circularly Permuted |
GC Content | 67.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE3 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Franklin Pierce University |
Annotation Status | In GenBank |
Plaque Notes | 3mm and 1mm, turbid plaques with fuzzy edges |
Number of Genes | 87 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978782 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
3.93 * 10^13 pfu/mL |
Pitt Freezer Box# |
135 |
Pitt Freezer Box Grid# |
E9 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |