Detailed Information for Phage DoctorFroggo |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Molly Nagle, John Seiss, Aisosa Esechie, Abby Book |
Year Found | 2020 |
Location Found | Pittsburgh, PA Allegheny |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.449019 N, 79.951918 W Map |
Discovery Notes | mixed with small rocks and sticks and other small debris |
Naming Notes | Aisosa's pet frog |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 20, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 578 |
Genome length (bp) | 61476 |
Character of genome ends | Circularly Permuted |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE4 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | clear, virulent, 2 different sizes |
Number of Genes | 89 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ322020 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
125 |
Pitt Freezer Box Grid# |
D3 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |