Microbacterium phage Duocatuli
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Detailed Information for Phage Duocatuli | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Natalie Schneider |
Year Found | 2021 |
Location Found | Washington, MO United States |
Finding Institution | St. Louis Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 38.546624 N, 91.01274 W Map |
Discovery Notes | The sample spot receives morning shade, and afternoon sun. The sample was mostly dry and crumbly. Sample was collected from a six inch depth and stored in a ziplock bag. Sample was taken at 7:30 am on a cool winters morning (about 40 degrees F) and stored in a refrigerator until I took my hour commute to school at 12:00 pm. |
Naming Notes | The phage name is latin for "Two puppies". I discovered Duocatuli from a sample taken from a hole that my two puppies dug in my yard. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 24, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 177 |
Genome length (bp) | 41551 |
Character of genome ends | Circularly Permuted |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EA |
Subcluster | EA1 |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | St. Louis Community College |
Annotation Status | In GenBank |
Plaque Notes | During the purification process plaques varied in size and number. The plaques were always temperate turbid and often displayed a surrounding halo. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | ON260823 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 158 |
Pitt Freezer Box Grid# | A2 |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |