Detailed Information for Phage Fosterous |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Rafael Alexandre |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 30°C |
GPS Coordinates | 40.4439 N, 79.9561 W Map |
Discovery Notes | The soil that Fosterous was found in was in muddy and wet. This soil was in a flower bed and was mixed with fertilizer, mulch, and leaves. It was a 60 degree Fahrenheit afternoon. |
Naming Notes | Since I adopted this phage, it is a "foster" phage, hence "Fosterous". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 18, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 953 |
Genome length (bp) | 59136 |
Character of genome ends | Circularly Permuted |
GC Content | 67.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DE |
Subcluster | DE1 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | Since Fosterous is able to produce cloudy plaques in addition to clear plaques, it can be concluded that Fosterous is a temperate phage that produces lysogens. |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | The plaques produced by Fosterous can be either large, round, and cloudy or small and clear. Their sizes can range from 1mm to 3.5 mm. |
Morphotype | Siphoviridae |
Number of Genes | 87 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH976510 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
55 |
Pitt Freezer Box Grid# |
F10 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |