Gordonia phage Galadriel
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| Detailed Information for Phage Galadriel | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Kenna Kita |
| Year Found | 2018 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.445194 N, 79.953444 W Map |
| Discovery Notes | The soil where this phage was found was taken from outside of the Cathedral of Learning at the University of Pittsburgh on 9/10/18. The soil felt very damp. The weather conditions were rainy and cold. There were lots of bushes around the area. |
| Naming Notes | Galadriel is one of my favorite characters from Lord of the Rings |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 15, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 698 |
| Genome length (bp) | 59400 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DE |
| Subcluster | DE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | This phage seems to form plaques of two distinct sizes, medium (around 2mm) and tiny plaques (less than 1mm). The plaques are clear, indicating this is a virulent phage. |
| Morphotype | Siphoviridae |
| Number of Genes | 86 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK937594 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 90 |
| Pitt Freezer Box Grid# | B11 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
