Gordonia phage HubbaBubba
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| Detailed Information for Phage HubbaBubba | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Emma Hanke and Josslyn Claflin |
| Year Found | 2023 |
| Location Found | Fort Collins, CO United States |
| Finding Institution | Doane University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.47828 N, 105.04455 W Map |
| Discovery Notes | The sample came from a garden outside of a church. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 6, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Paired-end reads |
| Read Length | 300 bp |
| Approximate Shotgun Coverage | 9009 |
| Genome length (bp) | 63959 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCCGCGTAC |
| GC Content | 66.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CR |
| Subcluster | CR4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Doane University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are tiny; sometimes they are clear and other times they are cloudy. |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV105555 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 182 |
| Pitt Freezer Box Grid# | B2 |
| Available Files | |
| GenBank File for Phamerator | Download |