Detailed Information for Phage HubbaBubba |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Emma Hanke and Josslyn Claflin |
Year Found | 2023 |
Location Found | Fort Collins, CO United States |
Finding Institution | Doane University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.47828 N, 105.04455 W Map |
Discovery Notes | The sample came from a garden outside of a church. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 6, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 9009 |
Genome length (bp) | 63959 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCCGCGTAC |
GC Content | 66.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CR |
Subcluster | CR4 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Doane University |
Annotation Status | Awaiting_QC |
Plaque Notes | The plaques are tiny; sometimes they are clear and other times they are cloudy. |
Number of Genes | 88 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
182 |
Pitt Freezer Box Grid# |
B2 |