Gordonia phage KidneyBean
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Detailed Information for Phage KidneyBean
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLove, Sbarounis, Pindras, Faust
Year Found2017
Location FoundKenosha, WI USA
Finding InstitutionCarthage College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates42.594267 N, 87.851474 W Map
Discovery NotesFound in newly placed soil on city owned patch of grass.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2159
Genome length (bp)67802
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCarthage College
Annotation StatusIn GenBank
Plaque NotesPlaques have a clear center and a large turbid exterior, leading to a "halo" plaque morphology.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

KidneyBean_1
(terminase small subunit)

KidneyBean_2

KidneyBean_3

KidneyBean_4

KidneyBean_5

KidneyBean_6

KidneyBean_7

KidneyBean_8

KidneyBean_9
(HicA-like toxin)

KidneyBean_10

KidneyBean_11

KidneyBean_12

KidneyBean_13

KidneyBean_14

KidneyBean_15

KidneyBean_16

KidneyBean_17

KidneyBean_18

KidneyBean_19
(lysin B)

KidneyBean_20

KidneyBean_21
(minor tail protein)

KidneyBean_22

KidneyBean_23
(HNH endonuclease)

KidneyBean_24
(terminase large subunit)

KidneyBean_25
(portal protein)

KidneyBean_26
(capsid maturation protease)

KidneyBean_27
(scaffolding protein)

KidneyBean_28
(capsid decoration protein)

KidneyBean_29
(major capsid protein)

KidneyBean_30

KidneyBean_31

KidneyBean_32

KidneyBean_33

KidneyBean_34

KidneyBean_35
(major tail protein)

KidneyBean_36

KidneyBean_37
(tail assembly chaperone)

KidneyBean_38
(tail assembly chaperone)

KidneyBean_39
(tape measure protein)

KidneyBean_40
(minor tail protein)

KidneyBean_41
(minor tail protein)

KidneyBean_42
(minor tail protein)

KidneyBean_43
(minor tail protein)

KidneyBean_44

KidneyBean_45

KidneyBean_46

KidneyBean_47
(lysin A, peptidase domain)

KidneyBean_48
(lysin A, glycosyl hydrolase domain)

KidneyBean_49
(holin)

KidneyBean_50

KidneyBean_51

KidneyBean_52
(DNA primase/polymerase)

KidneyBean_53

KidneyBean_54
(WhiB family transcription factor)

KidneyBean_55

KidneyBean_56
(MerR-like HTH DNA binding protein)

KidneyBean_57
(RuvC-like resolvase)

KidneyBean_58

KidneyBean_59

KidneyBean_60
(DnaE-like DNA polymerase III (alpha))

KidneyBean_61

KidneyBean_62

KidneyBean_63
(thioredoxin)

KidneyBean_64

KidneyBean_65
(AAA-ATPase)

KidneyBean_66

KidneyBean_67
(nuclease)

KidneyBean_68

KidneyBean_69

KidneyBean_70

KidneyBean_71

KidneyBean_72
(DNA helicase)

KidneyBean_73
(WhiB family transcription factor)

KidneyBean_74

KidneyBean_75

KidneyBean_76

KidneyBean_77

KidneyBean_78

KidneyBean_79

KidneyBean_80

KidneyBean_81

KidneyBean_82

KidneyBean_83

KidneyBean_84

KidneyBean_85

KidneyBean_86

KidneyBean_87

KidneyBean_88

KidneyBean_89

KidneyBean_90

KidneyBean_91

KidneyBean_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH727552
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 67
Pitt Freezer Box Grid# D6
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload