Gordonia phage NosilaM
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Detailed Information for Phage NosilaM
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAlison M. Rivera-Rodriguez
Year Found2016
Location FoundCayey, PR USA
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates18.099722 N, 66.164722 W Map
Discovery NotesFound in a rural area with a lot of vegetation in soil that was part clay, loamy and wet.
Naming NotesNosila is Alison spelled backwards. the M is from my middle name.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2204
Genome length (bp)67662
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Puerto Rico at Cayey
Annotation StatusIn GenBank
Plaque Notessmall plaques, approx. 1 mm diameter. They were clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

NosilaM_1
(terminase small subunit)

NosilaM_2

NosilaM_3

NosilaM_4

NosilaM_5

NosilaM_6

NosilaM_7

NosilaM_8
(HicA-like toxin)

NosilaM_9

NosilaM_10

NosilaM_11

NosilaM_12

NosilaM_13

NosilaM_14

NosilaM_15

NosilaM_16

NosilaM_17

NosilaM_18

NosilaM_19

NosilaM_20

NosilaM_21
(lysin B)

NosilaM_22

NosilaM_23

NosilaM_24

NosilaM_25

NosilaM_26
(HNH endonuclease)

NosilaM_27
(terminase large subunit)

NosilaM_28
(portal protein)

NosilaM_29
(capsid maturation protease)

NosilaM_30
(scaffolding protein)

NosilaM_31
(capsid decoration protein)

NosilaM_32
(major capsid protein)

NosilaM_33

NosilaM_34
(head-to-tail adaptor)

NosilaM_35

NosilaM_36

NosilaM_37
(tail terminator)

NosilaM_38
(major tail protein)

NosilaM_39

NosilaM_40
(tail assembly chaperone)

NosilaM_41
(tail assembly chaperone)

NosilaM_42
(tape measure protein)

NosilaM_43
(minor tail protein)

NosilaM_44
(minor tail protein)

NosilaM_45
(minor tail protein)

NosilaM_46
(minor tail protein)

NosilaM_47

NosilaM_48

NosilaM_49

NosilaM_50

NosilaM_51
(lysin A, peptidase domain)

NosilaM_52
(lysin A, glycosyl hydrolase domain)

NosilaM_53

NosilaM_54

NosilaM_55

NosilaM_56
(DNA primase/polymerase)

NosilaM_57

NosilaM_58
(WhiB family transcription factor)

NosilaM_59

NosilaM_60

NosilaM_61
(RuvC-like resolvase)

NosilaM_62
(DnaE-like DNA polymerase III (alpha))

NosilaM_63

NosilaM_64

NosilaM_65

NosilaM_66

NosilaM_67
(RecA-like recombinase)

NosilaM_68

NosilaM_69
(exonuclease)

NosilaM_70

NosilaM_71

NosilaM_72

NosilaM_73
(DNA helicase)

NosilaM_74
(WhiB family transcription factor)

NosilaM_75

NosilaM_76

NosilaM_77

NosilaM_78

NosilaM_79

NosilaM_80

NosilaM_81

NosilaM_82

NosilaM_83

NosilaM_84

NosilaM_85

NosilaM_86

NosilaM_87

NosilaM_88

NosilaM_89

NosilaM_90

NosilaM_91

NosilaM_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK376962
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2016UPRCNosilamAMR
SEA Lysate Titer 1 X 10^9
Date of SEA Lysate Titering Apr 6, 2017
Pitt Freezer Box# 46
Pitt Freezer Box Grid# B3
Available Files
GenBank File for PhameratorDownload