Gordonia phage Buggaboo
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Buggaboo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDatayashia Washington
Year Found2016
Location FoundCharleston, SC United States
Finding InstitutionCollege of Charleston
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates32.786603 N, 79.936294 W Map
Discovery Notes I got my soil sample from Marion Square on the right counter of the park, near the Holocaust Memorial Statue. The sample was a dark moist soil because of the rain from the previous day.
Naming NotesN/A
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage770
Genome length (bp)68626
Character of genome ends3' Sticky Overhang
GC Content65.6%
Sequencing Notesat 36875 bp approximately 20% of reads contain a G or C instead of consensus A
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Buggaboo_1

Buggaboo_2

Buggaboo_3

Buggaboo_4

Buggaboo_5

Buggaboo_6
(membrane protein)

Buggaboo_7
(HicA-like toxin)

Buggaboo_8

Buggaboo_9

Buggaboo_10

Buggaboo_11

Buggaboo_12

Buggaboo_13
(membrane protein)

Buggaboo_14

Buggaboo_15

Buggaboo_16

Buggaboo_17
(membrane protein)

Buggaboo_18

Buggaboo_19

Buggaboo_20
(lysin B)

Buggaboo_21

Buggaboo_22
(tailspike-like protein)

Buggaboo_23

Buggaboo_24
(HNH endonuclease)

Buggaboo_25
(terminase)

Buggaboo_26
(portal protein)

Buggaboo_27
(MuF-like minor capsid protein)

Buggaboo_28
(scaffolding protein)

Buggaboo_29
(LamD-like capsid decoration protein)

Buggaboo_30
(major capsid protein)

Buggaboo_31
(head-to-tail adaptor)

Buggaboo_32

Buggaboo_33

Buggaboo_34

Buggaboo_35

Buggaboo_36
(major tail protein)

Buggaboo_37

Buggaboo_38
(tail assembly chaperone)

Buggaboo_39
(tail assembly chaperone)

Buggaboo_40
(tape measure protein)

Buggaboo_41
(minor tail protein)

Buggaboo_42
(minor tail protein)

Buggaboo_43
(minor tail protein)

Buggaboo_44
(minor tail protein)

Buggaboo_45

Buggaboo_46

Buggaboo_47

Buggaboo_48

Buggaboo_49
(lysin A, C39 peptidase-domain)

Buggaboo_50
(lysin A, glycosyl hydrolase domain)

Buggaboo_51
(holin)

Buggaboo_52
(membrane protein)

Buggaboo_53

Buggaboo_54
(DNA primase/polymerase)

Buggaboo_55

Buggaboo_56
(WhiB family transcription factor)

Buggaboo_57

Buggaboo_58
(HTH DNA-binding domain protein)

Buggaboo_59
(RuvC-like resolvase)

Buggaboo_60

Buggaboo_61
(DnaE-like DNA polymerase III subunit (alpha))

Buggaboo_62

Buggaboo_63

Buggaboo_64

Buggaboo_65
(thioredoxin)

Buggaboo_66

Buggaboo_67
(AAA-ATPase)

Buggaboo_68
(exonuclease)

Buggaboo_69

Buggaboo_70

Buggaboo_71

Buggaboo_72

Buggaboo_73

Buggaboo_74
(DNA helicase)

Buggaboo_75
(WhiB family transcription factor)

Buggaboo_76

Buggaboo_77

Buggaboo_78

Buggaboo_79

Buggaboo_80

Buggaboo_81

Buggaboo_82

Buggaboo_83

Buggaboo_84

Buggaboo_85

Buggaboo_86

Buggaboo_87

Buggaboo_88

Buggaboo_89

Buggaboo_90

Buggaboo_91

Buggaboo_92

Buggaboo_93

Buggaboo_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH779499
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2 x 10*9
Pitt Freezer Box# 47
Pitt Freezer Box Grid# A3
Available Files
EM PictureDownload
GenBank File for PhameratorDownload