Detailed Information for Phage Buggaboo |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Datayashia Washington |
Year Found | 2016 |
Location Found | Charleston, SC USA |
Finding Institution | College of Charleston |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 32.786603 N, 79.936294 W Map |
Discovery Notes | I got my soil sample from Marion Square on the right counter of the park, near the Holocaust Memorial Statue. The sample was a dark moist soil because of the rain from the previous day. |
Naming Notes | N/A |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 770 |
Genome length (bp) | 68626 |
Character of genome ends | 3' Sticky Overhang |
GC Content | 65.6% |
Sequencing Notes | at 36875 bp approximately 20% of reads contain a G or C instead of consensus A |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CR |
Subcluster | CR2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH779499 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
2 x 10*9 |
Pitt Freezer Box# |
47 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |