Gordonia phage Kabluna
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Kabluna
Discovery Information
Isolation HostGordonia terrae 3612
Found BySolomon Klombers
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.441111 N, 79.954167 W Map
Discovery NotesSoil sample was retrieved from a Garden box outside of Wesley W. Posvar Hall. Temperature at time of collection was 61 degrees Fahrenheit. Weather conditions in the previous 24 hours were in the mid 40s and clear. Soil sample was collected on January 31st, 2016. Plaques were found using a direct plating procedure.
Naming NotesThe name "Kabluna" is an Ihalmiut word for 'invader,' or 'blight.' The Ihalmiut, literally "People from beyond," were a tribe of Inuit Indians who lived in Canada's Kivalliq region, present day Nunavut. The Ihalmiut used the word "Kabluna" to describe the diseases (and those who brought disease to them) which ultimately ended their way of life. As such, I thought the name 'Kabluna' apt for a bacteriophage, seeing as they are, from the perspective of the bacterial hosts, also 'invaders,' and 'blights.'
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 6, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3235
Genome length (bp)65869
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesIt appears that Kabluna may have two morphologies. There are lager plaques, roughly 1/10th of a cm in diameter, and smaller plaques roughly 1mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Kabluna_1
(terminase small subunit)

Kabluna_2

Kabluna_3

Kabluna_4

Kabluna_5

Kabluna_6

Kabluna_7

Kabluna_8
(HicA-like toxin)

Kabluna_9

Kabluna_10

Kabluna_11

Kabluna_12

Kabluna_13

Kabluna_14

Kabluna_15

Kabluna_16

Kabluna_17

Kabluna_18

Kabluna_19

Kabluna_20

Kabluna_21
(lysin B)

Kabluna_22

Kabluna_23

Kabluna_24

Kabluna_25

Kabluna_26
(HNH endonuclease)

Kabluna_27
(terminase large subunit)

Kabluna_28
(portal protein)

Kabluna_29
(capsid maturation protease)

Kabluna_30
(scaffolding protein)

Kabluna_31
(capsid decoration protein)

Kabluna_32
(major capsid protein)

Kabluna_33
(head-to-tail connector protein)

Kabluna_34
(head-to-tail connector protein)

Kabluna_35
(head-to-tail connector protein)

Kabluna_36
(head-to-tail connector protein)

Kabluna_37
(head-to-tail connector protein)

Kabluna_38
(major tail protein)

Kabluna_39

Kabluna_40
(tail assembly chaperone)

Kabluna_41
(tail assembly chaperone)

Kabluna_42
(tapemeasure protein)

Kabluna_43
(minor tail protein)

Kabluna_44
(minor tail protein)

Kabluna_45
(minor tail protein)

Kabluna_46
(minor tail protein)

Kabluna_47

Kabluna_48

Kabluna_49

Kabluna_50

Kabluna_51
(lysin A)

Kabluna_52
(lysin A)

Kabluna_53
(holin)

Kabluna_54

Kabluna_55

Kabluna_56
(DNA primase/polymerase)

Kabluna_57

Kabluna_58
(WhiB family transcription factor)

Kabluna_59

Kabluna_60
(HTH DNA binding domain protein)

Kabluna_61
(resolvase)

Kabluna_62

Kabluna_63
(DNA polymerase III alpha subunit)

Kabluna_64

Kabluna_65

Kabluna_66

Kabluna_67

Kabluna_68
(AAA-ATPase)

Kabluna_69
(nuclease)

Kabluna_70

Kabluna_71

Kabluna_72

Kabluna_73

Kabluna_74

Kabluna_75
(helicase)

Kabluna_76

Kabluna_77

Kabluna_78

Kabluna_79

Kabluna_80

Kabluna_81

Kabluna_82

Kabluna_83

Kabluna_84

Kabluna_85

Kabluna_86

Kabluna_87

Kabluna_88

Kabluna_89

Kabluna_90

Kabluna_91

Kabluna_92

Kabluna_93

Kabluna_94

Kabluna_95

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF919510
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# D10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload