Gordonia phage Lollipop1437
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Detailed Information for Phage Lollipop1437
Discovery Information
Isolation HostGordonia terrae 3612
Found BySara Feith
Year Found2016
Location FoundFort Myers, FL USA
Finding InstitutionFlorida Gulf Coast University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates26.460376 N, 81.780175 W Map
Discovery NotesThe phage was found in the food forest at Florida Gulf Coast University. The soil was moist and it was found on a hot day under a layer of mulch.
There could be a mixed population because the EM results came up with both myoviridae and siphoviridae.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage104
Genome length (bp)67311
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR3
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesThe plaques are clear and smaller than a millimeter.
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Lollipop1437_1
(terminase, small subunit)

Lollipop1437_2

Lollipop1437_3

Lollipop1437_4

Lollipop1437_5

Lollipop1437_6

Lollipop1437_7

Lollipop1437_8

Lollipop1437_9

Lollipop1437_10

Lollipop1437_11
(toxin in toxin/antitoxin system, HicA-like)

Lollipop1437_12

Lollipop1437_13

Lollipop1437_14

Lollipop1437_15

Lollipop1437_16

Lollipop1437_17

Lollipop1437_18

Lollipop1437_19

Lollipop1437_20

Lollipop1437_21

Lollipop1437_22

Lollipop1437_23
(lysin B)

Lollipop1437_24

Lollipop1437_25
(major tail protein)

Lollipop1437_26

Lollipop1437_27

Lollipop1437_28
(HNH endonuclease)

Lollipop1437_29
(terminase, large subunit)

Lollipop1437_30
(portal protein)

Lollipop1437_31
(capsid maturation protease)

Lollipop1437_32
(scaffolding protein)

Lollipop1437_33
(capsid decoration protein)

Lollipop1437_34
(major capsid protein)

Lollipop1437_35

Lollipop1437_36
(head-to-tail adaptor)

Lollipop1437_37

Lollipop1437_38

Lollipop1437_39
(tail terminator)

Lollipop1437_40
(major tail protein)

Lollipop1437_41

Lollipop1437_42
(tail assembly chaperone)

Lollipop1437_43
(tail assembly chaperone)

Lollipop1437_44
(tape measure protein)

Lollipop1437_45
(minor tail protein)

Lollipop1437_46
(minor tail protein)

Lollipop1437_47
(minor tail protein)

Lollipop1437_48
(minor tail protein)

Lollipop1437_49
(membrane protein)

Lollipop1437_50

Lollipop1437_51

Lollipop1437_52

Lollipop1437_53
(lysin A, protease M15 domain)

Lollipop1437_54
(lysin A, glycosyl hydrolase domain)

Lollipop1437_55
(holin)

Lollipop1437_56

Lollipop1437_57

Lollipop1437_58
(DNA primase/polymerase)

Lollipop1437_59

Lollipop1437_60

Lollipop1437_61
(helix-turn-helix DNA binding domain, MerR-like)

Lollipop1437_62
(RuvC-like resolvase)

Lollipop1437_63

Lollipop1437_64
(DnaE-like DNA polymerase III (alpha))

Lollipop1437_65

Lollipop1437_66

Lollipop1437_67

Lollipop1437_68

Lollipop1437_69
(AAA-ATPase)

Lollipop1437_70
(nuclease)

Lollipop1437_71

Lollipop1437_72

Lollipop1437_73

Lollipop1437_74

Lollipop1437_75

Lollipop1437_76
(Helicase)

Lollipop1437_77

Lollipop1437_78

Lollipop1437_79

Lollipop1437_80

Lollipop1437_81

Lollipop1437_82

Lollipop1437_83

Lollipop1437_84

Lollipop1437_85

Lollipop1437_86

Lollipop1437_87

Lollipop1437_88

Lollipop1437_89

Lollipop1437_90

Lollipop1437_91

Lollipop1437_92

Lollipop1437_93

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK977699
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.8 * 10^10 PFU/ml
Pitt Freezer Box# 44
Pitt Freezer Box Grid# H6
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload