Gordonia phage NovumRegina
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Detailed Information for Phage NovumRegina
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMorgan Queen and Daniela Frey
Year Found2019
Location FoundCrete, NE United States
Finding InstitutionDoane University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.621541 N, 96.948791 W Map
Discovery NotesFound in Doane Lake
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 15, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1014
Genome length (bp)67175
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionDoane University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

NovumRegina_1
(HNH endonuclease)

NovumRegina_2
(terminase small subunit)

NovumRegina_3

NovumRegina_4

NovumRegina_5

NovumRegina_6

NovumRegina_7

NovumRegina_8

NovumRegina_9
(HicA-like toxin)

NovumRegina_10

NovumRegina_11

NovumRegina_12

NovumRegina_13

NovumRegina_14

NovumRegina_15

NovumRegina_16

NovumRegina_17

NovumRegina_18

NovumRegina_19
(lysin B)

NovumRegina_20

NovumRegina_21

NovumRegina_22

NovumRegina_23
(HNH endonuclease)

NovumRegina_24
(terminase large subunit)

NovumRegina_25
(portal protein)

NovumRegina_26
(capsid maturation protease)

NovumRegina_27

NovumRegina_28
(capsid decoration protein)

NovumRegina_29
(major capsid protein)

NovumRegina_30

NovumRegina_31

NovumRegina_32

NovumRegina_33

NovumRegina_34

NovumRegina_35
(major tail protein)

NovumRegina_36

NovumRegina_37
(tail assembly chaperone)

NovumRegina_38
(tail assembly chaperone)

NovumRegina_39
(tape measure protein)

NovumRegina_40
(minor tail protein)

NovumRegina_41
(minor tail protein)

NovumRegina_42
(minor tail protein)

NovumRegina_43
(minor tail protein)

NovumRegina_44

NovumRegina_45

NovumRegina_46

NovumRegina_47
(lysin A, protease C39 domain)

NovumRegina_48
(lysin A, glycosyl hydrolase domain)

NovumRegina_49
(holin)

NovumRegina_50

NovumRegina_51

NovumRegina_52
(DNA primase/polymerase)

NovumRegina_53

NovumRegina_54
(WhiB family transcription factor)

NovumRegina_55

NovumRegina_56
(MerR-like helix-turn-helix DNA binding domain protein)

NovumRegina_57
(RuvC-like resolvase)

NovumRegina_58

NovumRegina_59

NovumRegina_60
(DnaE-like DNA polymerase III)

NovumRegina_61

NovumRegina_62

NovumRegina_63
(thioredoxin)

NovumRegina_64

NovumRegina_65
(AAA-ATPase)

NovumRegina_66
(Cas4 family exonuclease)

NovumRegina_67

NovumRegina_68

NovumRegina_69

NovumRegina_70

NovumRegina_71

NovumRegina_72
(DNA helicase)

NovumRegina_73
(WhiB family transcription factor)

NovumRegina_74

NovumRegina_75

NovumRegina_76

NovumRegina_77

NovumRegina_78

NovumRegina_79

NovumRegina_80

NovumRegina_81

NovumRegina_82

NovumRegina_83

NovumRegina_84

NovumRegina_85

NovumRegina_86

NovumRegina_87

NovumRegina_88

NovumRegina_89

NovumRegina_90

NovumRegina_91

NovumRegina_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889393
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 108
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload