Gordonia phage Sukkupi
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Detailed Information for Phage Sukkupi
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAgnes M. Cotto-Pereira
Year Found2017
Location FoundGurabo, PR USA
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates18.227222 N, 66.000833 W Map
Discovery NotesFound in a humid area in house backyard.
Naming NotesFrom a pet dog.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 28, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1545
Genome length (bp)66184
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content66.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR4
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Puerto Rico at Cayey
Annotation StatusIn GenBank
Plaque NotesClear plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Sukkupi_1
(terminase small subunit)

Sukkupi_2

Sukkupi_3

Sukkupi_4

Sukkupi_5

Sukkupi_6

Sukkupi_7
(HicA-like toxin)

Sukkupi_8

Sukkupi_9

Sukkupi_10

Sukkupi_11

Sukkupi_12
(membrane protein)

Sukkupi_13

Sukkupi_14

Sukkupi_15
(membrane protein)

Sukkupi_16

Sukkupi_17

Sukkupi_18

Sukkupi_19
(lysin B)

Sukkupi_20
(MazG-like nucleotide pyrophosphohydrolase)

Sukkupi_21
(membrane protein)

Sukkupi_22

Sukkupi_23
(minor tail protein)

Sukkupi_24

Sukkupi_25
(HNH endonuclease)

Sukkupi_26
(terminase large subunit)

Sukkupi_27
(portal protein)

Sukkupi_28
(capsid maturation protease and MuF-like fusion protein)

Sukkupi_29
(scaffolding protein)

Sukkupi_30
(LamD-like capsid decoration protein)

Sukkupi_31
(major capsid protein)

Sukkupi_32

Sukkupi_33
(head-to-tail adaptor)

Sukkupi_34

Sukkupi_35

Sukkupi_36
(tail terminator)

Sukkupi_37
(major tail protein)

Sukkupi_38

Sukkupi_39
(tail assembly chaperone)

Sukkupi_40
(tail assembly chaperone)

Sukkupi_41
(tape measure protein)

Sukkupi_42
(minor tail protein)

Sukkupi_43
(minor tail protein)

Sukkupi_44
(minor tail protein)

Sukkupi_45
(minor tail protein)

Sukkupi_46
(minor tail protein)

Sukkupi_47

Sukkupi_48
(lysin A, protease C39 domain)

Sukkupi_49
(lysin A, glycosyl hydrolase domain)

Sukkupi_50
(holin)

Sukkupi_51
(membrane protein)

Sukkupi_52
(membrane protein)

Sukkupi_53
(DNA primase/polymerase)

Sukkupi_54

Sukkupi_55
(WhiB family transcription factor)

Sukkupi_56

Sukkupi_57
(MerR-like helix-turn-helix DNA binding domain protein)

Sukkupi_58
(RuvC-like resolvase)

Sukkupi_59

Sukkupi_60
(DnaE-like DNA polymerase III (alpha))

Sukkupi_61

Sukkupi_62

Sukkupi_63

Sukkupi_64
(thioredoxin)

Sukkupi_65

Sukkupi_66
(RecA-like DNA recombinase)

Sukkupi_67
(RecB-like exonuclease/helicase)

Sukkupi_68

Sukkupi_69

Sukkupi_70

Sukkupi_71
(DNA helicase)

Sukkupi_72
(WhiB family transcription factor)

Sukkupi_73

Sukkupi_74
(membrane protein)

Sukkupi_75

Sukkupi_76

Sukkupi_77

Sukkupi_78

Sukkupi_79

Sukkupi_80

Sukkupi_81

Sukkupi_82

Sukkupi_83

Sukkupi_84

Sukkupi_85

Sukkupi_86

Sukkupi_87

Sukkupi_88

Sukkupi_89

Sukkupi_90

Sukkupi_91

Sukkupi_92

Sukkupi_93

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN369753
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 72
Pitt Freezer Box Grid# F7
Available Files
GenBank File for PhameratorDownload