| Detailed Information for Phage IDyn |
| Discovery Information |
| Isolation Host | Gordonia terrae NRRL B-16283 |
| Found By | Jailyn Gales |
| Year Found | 2017 |
| Location Found | Durham, NC USA |
| Finding Institution | Durham Technical Community College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.025519 N, 78.8945 W Map |
| Discovery Notes | The initial soil sample was collected by Heather Aloor (biology instructor), who had an abundance of phage present on her direct isolate plate. I adopted a phage and used it as my own.
|
| Naming Notes | The name is a combination of two family member names. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 18, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 142 |
| Genome length (bp) | 65218 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCCGCGTAC |
| GC Content | 66.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CR |
| Subcluster | CR4 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Durham Technical Community College |
| Annotation Status | In GenBank |
| Plaque Notes | The intial phage was 2mm in length, after a series of plaque assays, the sized varied between 2mm and 3mm. |
| Number of Genes | 90 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK433272 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
3.66x10^8 |
| Pitt Freezer Box# |
49 |
| Pitt Freezer Box Grid# |
D12 |
| Available Files |
| GenBank File for Phamerator | Download |